{"id":61,"date":"2018-01-16T11:47:45","date_gmt":"2018-01-16T15:47:45","guid":{"rendered":"https:\/\/wpdev.whoi.edu\/lab-migration2\/data\/"},"modified":"2025-10-17T13:08:09","modified_gmt":"2025-10-17T17:08:09","slug":"data","status":"publish","type":"page","link":"https:\/\/www2.whoi.edu\/site\/molecular-environmental-science\/data\/","title":{"rendered":"Data"},"content":{"rendered":"\n\n\t

Archived Data<\/h1>\n

We use public data repositories to make our data available for wide-spread use. Feel free to contact us if you have questions about any of these datasets.<\/p>\n

Scroll to the right for information about publications using these data.<\/p>\n\n\t\t\t\n\t\t\n\t\t\t\n\t\t
\t\t\t\t\t\n\t\t\t\t\t\t\t\t\t\t\t\tNumber\t\t\t\t\t\n\t\t\t\t\t<\/th>\t\t\t\t\t\n\t\t\t\t\t\t\t\t\t\t\t\tRepository\t\t\t\t\t\n\t\t\t\t\t<\/th>\t\t\t\t\t\n\t\t\t\t\t\t\t\t\t\t\t\tDescription\t\t\t\t\t\n\t\t\t\t\t<\/th>\t\t\t\t\t\n\t\t\t\t\t\t\t\t\t\t\t\tRelated publication\t\t\t\t\t\n\t\t\t\t\t<\/th>\t\t<\/tr>\n\t<\/thead>\n\t\t
MTBLS144<\/a><\/td>MetaboLights<\/td>Dissolved organic matter released by Thalassiosira pseudonana<\/i><\/td>Longnecker et al. (2015)<\/a><\/td><\/tr>
MTBLS154<\/a><\/td>MetaboLights<\/td>Metabolites released by Thalassiosira pseudonana<\/i> under P-limited and P-replete growth<\/td>Kujawinski et al. (2017)<\/a>; Longnecker & Kujawinski (2017)<\/a><\/td><\/tr>
MTBLS155<\/a><\/td>MetaboLights<\/td>Release of ecologically relevant metabolites by the cyanobacterium, Synechococcus elongatus<\/i> CCMP 1631<\/td>Fiore et al. (2015)<\/a><\/td><\/tr>
MTBLS157<\/a><\/td>MetaboLights<\/td>Evidence for quorum sensing and differential metabolite production by Ruegeria pomeroyi<\/i> in response to DMSP<\/td>Johnson et al. (2016)<\/a><\/td><\/tr>
MTBLS281<\/a><\/td>MetaboLights<\/td>Sponge filtration has a molecular-level impact on the chemical composition of reef dissolved organic matter<\/td>Fiore et al. (2017)<\/a><\/td><\/tr>
MTBLS293<\/a><\/td>MetaboLights<\/td>Metabolites from surface seawater collected in Narragansett Bay<\/td>unpublished<\/td><\/tr>
MTBLS295<\/a><\/td>MetaboLights<\/td>A phosphate starvation response gene (psr1<\/i>-like) is present and expressed in Micromonas pusilla<\/i> and other marine algae<\/td>Fiore et al. (2021)<\/a><\/td><\/tr>
MTBLS366<\/a><\/td>MetaboLights<\/td>Using network analysis to discern compositional patterns in ultrahigh resolution mass spectrometry data of dissolved organic matter<\/td>Longnecker and Kujawinski (2016)<\/a><\/td><\/tr>
MTBLS428<\/a><\/td>MetaboLights<\/td>Dissolved organic carbon compounds in deep-sea hydrothermal vent fluids from the East Pacific Rise at 9\u00ba50’N<\/td>Longnecker et al. (2018)<\/a><\/td><\/tr>
MTBLS461<\/a><\/td>MetaboLights<\/td>Intracellular metabolites from an experimental manipulation of marine microorganisms<\/td>Longnecker and Kujawinski (2020)<\/a><\/td><\/tr>
MTBLS567<\/a><\/td>MetaboLights<\/td>Dissolved organic matter released by three different Prochlorococcus<\/i> strains (a high light-adapted strain (MIT9301; HLII) and two low light-adapted strains (MIT9313; LLIV and MIT0801; LLI)<\/td>Kujawinski et al. (2023)<\/a><\/td><\/tr>
MTBLS1024<\/a><\/td>MetaboLights<\/td>Organic sulfur: a spatially variable and understudied component of marine organic matter<\/td>Longnecker et al. (2020)<\/a><\/td><\/tr>
MTBLS1751<\/a><\/td>MetaboLights<\/td>Resource Partitioning of Diatom Metabolites that Support Bacterial Heterotrophy in the Ocean (UPLC-MS assay)<\/td>Ferrer-Gonz\u00e1lez,et al. (2020)<\/a><\/td><\/tr>
MTBLS1820<\/a><\/td>MetaboLights<\/td>Extracellular reef metabolites across the protected Jardines de la Reina, Cuba reef-system<\/td>Weber et al. (2020)<\/a><\/td><\/tr>
MTBLS1822<\/a><\/td>MetaboLights<\/td>Migratory zooplankton excreta and its influence on prokaryotic communities<\/td>Maas et al. (2020)<\/a><\/td><\/tr>
MTBLS1752<\/a><\/td>MetaboLights<\/td>Insights into the controls on metabolite distributions along a latitudinal transect of the western Atlantic Ocean<\/td>Johnson et al. (2023)<\/a><\/td><\/tr>
MTBLS2356<\/a><\/td>MetaboLights<\/td>Dissolved targeted metabolites from the Bermuda Atlantic Time-series Study: 2016-2019<\/td>Liu et al. (2022)<\/a>; Longnecker et al. (2024)<\/a><\/td><\/tr>
project 2204<\/a><\/td>BCO-DMO<\/td>Data from a 2013 cruise on the R\/V Knorr<\/i><\/td>Rocke et al. (2015)<\/a>,\nLongnecker et al. (2015)<\/a>,\nLongnecker and Kujawinski (2017)<\/a>,\nJohnson et al. (2020)<\/a>,\nLongnecker et al. (2020)<\/a><\/td><\/tr>
project 854100<\/a><\/td>BCO-DMO<\/td>The Metabolic Response of Coastal Bacteria to Mortality-Derived Phytoplankton Dissolved Organic Matter” (MortalityDOM)<\/td>Longnecker and Kujawinski (2020)<\/a>,<\/td><\/tr>
doi:10.7266\/N7W95762<\/a><\/td>Gulf of Mexico Research Initiative repository<\/td>Chemical transformation of seawater-soluble crude oil components during microbial oxidation: metagenomics data<\/td>Liu et al. (2020)<\/a><\/td><\/tr>
doi:10.7266\/N71C1TTK<\/a><\/td>Gulf of Mexico Research Initiative repository<\/td>Chemical transformation of seawater-soluble crude oil components during microbial oxidation: nutrient and DOC data<\/td>Liu et al. (2020)<\/a><\/td><\/tr>
doi:10.7266\/N7N29TW0<\/a><\/td>Gulf of Mexico Research Initiative repository<\/td>Chemical transformation of seawater-soluble crude oil components during microbial oxidation: targeted metabolomics data<\/td>Liu et al. (2020)<\/a><\/td><\/tr>
doi:10.7266\/N7WM1BBP<\/a><\/td>Gulf of Mexico Research Initiative repository<\/td>Chemical transformation of seawater-soluble crude oil components during microbial oxidation: non-targeted metabolomics data<\/td>Liu et al. (2020)<\/a><\/td><\/tr>
doi:10.25345\/C5D25T<\/a><\/td>MassIVE<\/td>Marine dissolved organic matter and algal extracts<\/td>unpublished<\/td><\/tr>
MTBLS3512<\/a><\/td>MetaboLights<\/td>Carboxyl-rich alicyclic molecules (CRAM) in marine dissolved organic matter from the northwestern Sargasso Sea: untargeted metabolomics data<\/td>Liu, Shuting et al. (2020)<\/a><\/td><\/tr>
MTBLS5229<\/a><\/td>MetaboLights<\/td>Chitin utilization by marine picocyanobacteria and the evolution of a planktonic lifestyle: targeted metabolomics data<\/td>Capovilla (2023)<\/a><\/td><\/tr>
MTBLS5228<\/a><\/td>MetaboLights<\/td>Dissolved untargeted metabolite data from the Bermuda Atlantic Time-series Study: 2016-2019<\/td>McParland et al. (in revision)<\/td><\/tr>
MTBLS6735<\/a><\/td>MetaboLights<\/td>Untargeted metabolomics data of dissolved organic matter in the western Atlantic Ocean<\/td>Longnecker et al. L&O Lett. (2020)<\/a><\/td><\/tr>
MTBLS1807<\/a><\/td>MetaboLights<\/td>Intracellular metabolite data from four phytoplankton species associated with bloom formation: targeted and untargeted metabolomics<\/td>McLean et al. (2021)<\/a><\/td><\/tr>
MTBLS8122<\/a><\/td>MetaboLights<\/td>Suboxic DOM is bioavailable to surface prokaryotes in a simulated overturn of an oxygen minimum zone, Devil’s Hole, Bermuda: untargeted metabolomics data<\/td>Parsons, et al. (2023)<\/a><\/td><\/tr>
MTBLS9008<\/a><\/td>MetaboLights<\/td>Extracellular metabolites quantified on St. John, U.S. Virgin Island coral reefs and seagrass meadow using benzoyl chloride derivatization.<\/td>Garcia, et al. (2024)<\/a><\/td><\/tr>\t<\/tbody>\n<\/table>\n\n","protected":false},"excerpt":{"rendered":"

Archived Data We use public data repositories to make our data available for wide-spread use. Feel free to contact us if you have questions about any of these datasets. Scroll to the right for information about publications using these data. Number Repository Description Related publication MTBLS144 MetaboLights Dissolved organic matter released by Thalassiosira pseudonana Longnecker…<\/p>\n","protected":false},"author":26,"featured_media":0,"parent":0,"menu_order":7,"comment_status":"closed","ping_status":"closed","template":"","meta":[],"_links":{"self":[{"href":"https:\/\/www2.whoi.edu\/site\/molecular-environmental-science\/wp-json\/wp\/v2\/pages\/61"}],"collection":[{"href":"https:\/\/www2.whoi.edu\/site\/molecular-environmental-science\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/www2.whoi.edu\/site\/molecular-environmental-science\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/www2.whoi.edu\/site\/molecular-environmental-science\/wp-json\/wp\/v2\/users\/26"}],"replies":[{"embeddable":true,"href":"https:\/\/www2.whoi.edu\/site\/molecular-environmental-science\/wp-json\/wp\/v2\/comments?post=61"}],"version-history":[{"count":3,"href":"https:\/\/www2.whoi.edu\/site\/molecular-environmental-science\/wp-json\/wp\/v2\/pages\/61\/revisions"}],"predecessor-version":[{"id":461,"href":"https:\/\/www2.whoi.edu\/site\/molecular-environmental-science\/wp-json\/wp\/v2\/pages\/61\/revisions\/461"}],"wp:attachment":[{"href":"https:\/\/www2.whoi.edu\/site\/molecular-environmental-science\/wp-json\/wp\/v2\/media?parent=61"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}