{"id":797,"date":"2018-10-15T16:49:47","date_gmt":"2018-10-15T20:49:47","guid":{"rendered":"https:\/\/www2.whoi.edu\/site\/repetagroup\/?page_id=797"},"modified":"2022-12-23T13:11:17","modified_gmt":"2022-12-23T17:11:17","slug":"phaeodactylum-tricornutum-analytical-results","status":"publish","type":"page","link":"https:\/\/www2.whoi.edu\/site\/repetagroup\/specdrom\/phytoplankton-cultures\/phaeodactylum-tricornutum\/phaeodactylum-tricornutum-analytical-results\/","title":{"rendered":"Phaeodactylum tricornutum Analytical Results"},"content":{"rendered":"\n

\n\t\tAnalytical Results\n\t<\/h1>\n\t

Chromatographic Overviews<\/h3>\n

Mass Spectral<\/h3>\n

For each mass spectral acquisition polarity, two visualizations are presented:<\/p>\n

Total Ion Chromatogram (“TIC”)<\/h3>\n

The TIC is a trace of the summed intensity of all ions as a function of time.<\/p>\n

Note that in runs of complex samples such as these algal exudates, there are so many compounds co-eluting that individual peaks are not observed on the trace. Greater information visualization is possible in the Topological Overview.<\/p>\n

A TIC is available for the\u00a0positive<\/a>\u00a0and\u00a0negative<\/a>\u00a0electrospray mode.<\/p>\n

Topological (“Map”)<\/h3>\n

This is a top-down, or bird’s-eye view of the data sets, plotting mass as a function of time, with mass intensity increasing with color intensity.<\/p>\n

A topological view is available for the\u00a0positive<\/a>\u00a0 and\u00a0negative<\/a>\u00a0electrospray mode.<\/p>\n

Optical (UV-Visible)<\/h3>\n

For the optical absobance acquisition, two types of visualization are presented:<\/p>\n

3D<\/h3>\n

These are various views of\u00a0intensity vs. wavelength vs. time<\/a>.<\/p>\n

Specific Wavelength<\/h3>\n

Two generally diagnostic\u00a0wavelengths<\/a>\u00a0(254 and 290 nm) are presented.<\/p>\n

Compound Summary Table<\/h3>\n

A\u00a0table<\/a>\u00a0showing potential retention-time \/ molecular weight pairs, and their molecular ions as determined by the “mzMine” program ( see “http:\/\/mzmine.sourceforge.net” for more information on this program).<\/p>\n\n","protected":false},"excerpt":{"rendered":"

Analytical Results Chromatographic Overviews Mass Spectral For each mass spectral acquisition polarity, two visualizations are presented: Total Ion Chromatogram (“TIC”) The TIC is a trace of the summed intensity of all ions as a function of time. Note that in runs of complex samples such as these algal exudates, there are so many compounds co-eluting…<\/p>\n","protected":false},"author":2,"featured_media":0,"parent":759,"menu_order":3,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":"","_members_access_role":[],"_members_access_error":""},"class_list":["post-797","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/www2.whoi.edu\/site\/repetagroup\/wp-json\/wp\/v2\/pages\/797","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www2.whoi.edu\/site\/repetagroup\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/www2.whoi.edu\/site\/repetagroup\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/www2.whoi.edu\/site\/repetagroup\/wp-json\/wp\/v2\/users\/2"}],"replies":[{"embeddable":true,"href":"https:\/\/www2.whoi.edu\/site\/repetagroup\/wp-json\/wp\/v2\/comments?post=797"}],"version-history":[{"count":3,"href":"https:\/\/www2.whoi.edu\/site\/repetagroup\/wp-json\/wp\/v2\/pages\/797\/revisions"}],"predecessor-version":[{"id":1282,"href":"https:\/\/www2.whoi.edu\/site\/repetagroup\/wp-json\/wp\/v2\/pages\/797\/revisions\/1282"}],"up":[{"embeddable":true,"href":"https:\/\/www2.whoi.edu\/site\/repetagroup\/wp-json\/wp\/v2\/pages\/759"}],"wp:attachment":[{"href":"https:\/\/www2.whoi.edu\/site\/repetagroup\/wp-json\/wp\/v2\/media?parent=797"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}