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Publications

*eq. contribution

 

In review

 

Hackl T, Trigodet F, Eren M, Biller S, Eppley J, Luo E, Burger A, DeLong E, Fischer M. proovframe: frameshift-correction for long-read (meta)genomics.

 

2023

 

Hackl T, Laurenceau R, Ankenbrand M, Bliem C, Cariani Z, Thomas E, Dooley K, Arellano A, Hogle S, Berube P, Leventhal G, Luo E, et al. Novel integrative elements and genomic plasticity in ocean ecosystems. Cell 186(1):e16

 

2022

 

Eppley J, Biller S*, Luo E*, Burger A, DeLong E. Marine viral particles reveal an expansive repertoire of phage-parasitizing mobile elements. PNAS 119(43): e2212722119

 

Luo E, Leu A, Eppley J, Karl D, DeLong E. Diversity and origins of bacterial and archaeal viruses on sinking particles reaching the abyssal open ocean. The ISME Journal

 

Linney M, Eppley J, Romano A, Luo E, DeLong E, Karl D. Microbial sources of exocellular DNA in the ocean. Applied and Environmental Microbiology

 

2020

 

Luo E, Eppley J, Romano A, Mende D, DeLong E. Virioplankton population dynamics and reproductive strategies in the oligotrophic open ocean water column. The ISME Journal 14: 1304-1315

 

Beaulaurier J,* Luo E*, Eppley J*, Den Uyl P, Dai X, Turner D, Pendelton M, Juul S, Harrington E, DeLong E. Assembly-free single-molecule sequencing recovers complete virus genomes from natural microbial communities. Genome Research 30(3): 437-446

 

Coenen A*, Hu S*, Luo E*, Muratore D*, Weitz J. A primer for microbiome time-series analysis. Frontiers in Genetics 11: 310

 

McMullen A*, Luo E*, Martinez-Hernandez F, Tominaga K, Ogata H, Yoshida T, DeLong E, Martinez-Garcia M. Diel cycling of the cosmopolitan abundant Pelagibacter virus 37-F6: one of the most abundant viruses on Earth. Environmental Microbiology Reports 12(2): 214-219

 

2017

 

Luo E, Aylward F, Mende D, DeLong E. Bacteriophage distributions and temporal variability in the ocean's interior. mBio 8(6): 01903-17

 

Wheeler J, Luo E, Helfrich K, Anderson E, Starczak V, Mullineaux L. Light stimulates swimming behavior of larval eastern oysters (Crassostrea virginica) in turbulent flow. Marine Ecology Progress Series 571: 109-120

 

2016

 

Dutton EM, Luo E, Cembrowski A, Shore J, Frederickson M. Three’s a crowd: trade-offs between attracting pollinators and ant bodyguards with nectar rewards in Turnera. The American Naturalist 188(1): 38-51

 

2014

 

Luo E, Ogilvie J, Thomson J. Stimulation of flower nectar replenishment by removal: A survey of eleven animal-pollinated plant species. Journal of Pollination Ecology 12(7): 52-62